PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA08G25370.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 263aa    MW: 27613.4 Da    PI: 7.5116
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA08G25370.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.41.3e-1395139554
                      HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      h e+Er+RR+++N +f eLr  +P+       +++Ka+ L  Av+YI +L
  ONIVA08G25370.1  95 HVEAERQRREKLNRRFCELRAAVPTV-----SRMDKASLLADAVDYIAEL 139
                      889**********************6.....4***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MDELVLSPSS FSATACFPTL DFEFCEVPDQ WLLGLGHDEL DKDAAASALA AAAASQSASN  60
DDVPRNPPAT TTTTKRRGRK PGPRSGGGGA PPIGHVEAER QRREKLNRRF CELRAAVPTV  120
SRMDKASLLA DAVDYIAELR RRVERLEAEA RRAPLAPSAA AAAAWAAGLG AGAIGRDDLV  180
VRMVGRDAAI LRLTTAAAAA RHAPARMMCA VRGLNLAVQH ASVARVGGAT VQDVMVDDVP  240
AALQDEASLR AALLHTLQLA DTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46760.14e-16bHLH family protein