PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA08G25630.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

HSF

Protein Properties

Length: 491aa MW: 52290.6 Da PI: 6.0885

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA08G25630.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111.8	4.6e-35	111	202	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelle 95 Fl+k+y++++d++++++isw+++g++fvv+ + efa+++LpkyFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ F++g+++ll+ ONIVA08G25630.1 111 FLTKTYQLVDDPAVDDVISWNDDGSTFVVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANDCFRRGERRLLC 195 9***************************************************************99.........************* PP XXXXXXX CS HSF_DNA-bind 96 kikrkks 102 +i+r+k ONIVA08G25630.1 196 EIHRRKV 202 **986 PP

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence
MKGSRLAVKE SCLPMTMPMP ETFAQYSNPL RSTRAYGQLC RKQPDTTVYP GQICAAAGGG 60 GGMADQTAAA VVVVGGAAAT MGEPSPPPPA PAAEAAGVGV GQQQRTVPTP FLTKTYQLVD 120 DPAVDDVISW NDDGSTFVVW RPAEFARDLL PKYFKHNNFS SFVRQLNTYG FRKIVPDRWE 180 FANDCFRRGE RRLLCEIHRR KVTPPAPAAT TAAVAAAIPM ALPVTTTRDG SPVLSGEEQV 240 ISSSSSPEPP LVLPQAPSGS GSGGVASGDV GDENERLRRE NAQLARELSQ MRKLCNNIIL 300 LMSKYASTQQ LDAANASSAA GNNNNNNCSG ESAEAATPLP LPAVLDLMPS CPGAASAAAP 360 VSDNEEGMMS AKLFGVSIGR KRMRHDGGGD DDHAATVKAE PMDGRPHGKD EQSAETQAWP 420 IYRPRPVYQP IRACNGYEYD RAGSDQDEYG AKPSNQDKKD LRTCVNNLLV TGAGTLDVRD 480 QLPTQATTVR S

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence

MKGSRLAVKE SCLPMTMPMP ETFAQYSNPL RSTRAYGQLC RKQPDTTVYP GQICAAAGGG  60
GGMADQTAAA VVVVGGAAAT MGEPSPPPPA PAAEAAGVGV GQQQRTVPTP FLTKTYQLVD  120
DPAVDDVISW NDDGSTFVVW RPAEFARDLL PKYFKHNNFS SFVRQLNTYG FRKIVPDRWE  180
FANDCFRRGE RRLLCEIHRR KVTPPAPAAT TAAVAAAIPM ALPVTTTRDG SPVLSGEEQV  240
ISSSSSPEPP LVLPQAPSGS GSGGVASGDV GDENERLRRE NAQLARELSQ MRKLCNNIIL  300
LMSKYASTQQ LDAANASSAA GNNNNNNCSG ESAEAATPLP LPAVLDLMPS CPGAASAAAP  360
VSDNEEGMMS AKLFGVSIGR KRMRHDGGGD DDHAATVKAE PMDGRPHGKD EQSAETQAWP  420
IYRPRPVYQP IRACNGYEYD RAGSDQDEYG AKPSNQDKKD LRTCVNNLLV TGAGTLDVRD  480
QLPTQATTVR S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	5e-61	HSF family protein

Link Out ? help Back to Top
Ensembl	ONIVA08G25630.1