PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA09G10010.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 514aa MW: 50454.3 Da PI: 7.1162

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA09G10010.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.7	7.5e-12	272	317	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq ONIVA09G10010.1 272 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 317 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence
MQPTTREMQA MAAAAAAGQI SLDDLRNGGG VAANAGGGGG GVHDDFLDQM LSSLPPSAWP 60 DLAAGKAAED DAEGMHHHHH HHQQQFGGPY DESAMLASRL RQHQISGGGG GGGGGAAAVK 120 QMVLQQLADL RQGHHMMLQG LGGRSPAGGG GGGGDGGLLL PLTLGSGGSG GDVQALLKAA 180 AANSAGGGDA GGVYGGGFAG SLHQQQQHFQ PHPQTAPTIP TQSFGGGGGG GGGGTASGGG 240 AAQPQAGAAG GGAPAPPRQR VRARRGQATD PHSIAERLRR ERIAERMKAL QELVPNANKT 300 DKASMLDEII DYVKFLQLQV KASTYTKLLI HVLSMSRLGG AAAVAPLVAD MSSEGRGGGA 360 ANGGAPAAAA AAAGSDSLTV TEQQVAKLME EDMGTAMQYL QGKGLCLMPI SLASAISSAT 420 CHLRPPVVAA AAAQQFPAGL GAAAAAAHHH QLSAAAAAAA AMRGHLPGLN ADGSVPASPS 480 MSVLTAQSAM ANGGGGAADG EGSQLKDAAS VSKP

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence

MQPTTREMQA MAAAAAAGQI SLDDLRNGGG VAANAGGGGG GVHDDFLDQM LSSLPPSAWP  60
DLAAGKAAED DAEGMHHHHH HHQQQFGGPY DESAMLASRL RQHQISGGGG GGGGGAAAVK  120
QMVLQQLADL RQGHHMMLQG LGGRSPAGGG GGGGDGGLLL PLTLGSGGSG GDVQALLKAA  180
AANSAGGGDA GGVYGGGFAG SLHQQQQHFQ PHPQTAPTIP TQSFGGGGGG GGGGTASGGG  240
AAQPQAGAAG GGAPAPPRQR VRARRGQATD PHSIAERLRR ERIAERMKAL QELVPNANKT  300
DKASMLDEII DYVKFLQLQV KASTYTKLLI HVLSMSRLGG AAAVAPLVAD MSSEGRGGGA  360
ANGGAPAAAA AAAGSDSLTV TEQQVAKLME EDMGTAMQYL QGKGLCLMPI SLASAISSAT  420
CHLRPPVVAA AAAQQFPAGL GAAAAAAHHH QLSAAAAAAA AMRGHLPGLN ADGSVPASPS  480
MSVLTAQSAM ANGGGGAADG EGSQLKDAAS VSKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	142	150	GGRSPAGGG
2	277	282	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	3e-46	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA09G10010.1