PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA09G10010.2

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 530aa MW: 52180.4 Da PI: 7.2609

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA09G10010.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.7	7.8e-12	300	345	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq ONIVA09G10010.2 300 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 345 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 530 aa Download sequence
MQPTTREMQA MAAAAAAGQI SLDDLRNGGG VAANAGGGGG GVHDDFLDQM LSSLPPSAWP 60 DLAAGKAAED DAEGMHHHHH HHQQQFGGPY DESAMLASRL RQHQISGGGG GGGGGAAAVK 120 QMVLQQLADL RQGHHMMLQG LGGRSPAGGG GGGGDGGLLL PLTLGSGGSG GDVQALLKAA 180 AANSAGGGDA GGVYGGGFAG SLHQQQQHFQ PHPQVLINSL ADISHGSPRL KTLKHRPCVC 240 LQTAPTIPTQ SFGGGGGGGG GGTASGGGAA QPQAGAAGGG APAPPRQRVR ARRGQATDPH 300 SIAERLRRER IAERMKALQE LVPNANKTDK ASMLDEIIDY VKFLQLQVLS MSRLGGAAAV 360 APLVADMSSE GRGGGAANGG APAAAAAAAG SDSLTVTEQQ VAKLMEEDMG TAMQYLQGKG 420 LCLMPISLAS AISSATCHLR PPVVAAAAAQ QFPAGLGAAA AAAHHHQLSA AAAAAAAMRG 480 HLPGLNADGS VPASPSMSVL TAQSAMANGG GGAADGEGSQ LKDAASVSKP

Sequence ? help Back to Top

Protein Sequence Length: 530 aa Download sequence

MQPTTREMQA MAAAAAAGQI SLDDLRNGGG VAANAGGGGG GVHDDFLDQM LSSLPPSAWP  60
DLAAGKAAED DAEGMHHHHH HHQQQFGGPY DESAMLASRL RQHQISGGGG GGGGGAAAVK  120
QMVLQQLADL RQGHHMMLQG LGGRSPAGGG GGGGDGGLLL PLTLGSGGSG GDVQALLKAA  180
AANSAGGGDA GGVYGGGFAG SLHQQQQHFQ PHPQVLINSL ADISHGSPRL KTLKHRPCVC  240
LQTAPTIPTQ SFGGGGGGGG GGTASGGGAA QPQAGAAGGG APAPPRQRVR ARRGQATDPH  300
SIAERLRRER IAERMKALQE LVPNANKTDK ASMLDEIIDY VKFLQLQVLS MSRLGGAAAV  360
APLVADMSSE GRGGGAANGG APAAAAAAAG SDSLTVTEQQ VAKLMEEDMG TAMQYLQGKG  420
LCLMPISLAS AISSATCHLR PPVVAAAAAQ QFPAGLGAAA AAAHHHQLSA AAAAAAAMRG  480
HLPGLNADGS VPASPSMSVL TAQSAMANGG GGAADGEGSQ LKDAASVSKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	142	150	GGRSPAGGG
2	305	310	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	1e-45	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA09G10010.2