PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA09G10550.2
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family YABBY
Protein Properties Length: 236aa    MW: 24196.2 Da    PI: 6.6691
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA09G10550.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY27.97.3e-091501802959
            YABBY  29 tslfkvvtvrCGhCtsllsvnlakasqllaa 59 
                      tslfk+v vrCGhC+sll+vn++     ++a
  ONIVA09G10550.2 150 TSLFKTVMVRCGHCSSLLTVNIRGLLLPTSA 180
                      89********************987765555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MEPWRQGGAV GCGRRPAGEQ LGTGVGSTRR RRPHPQPLQF PPASATSVFA CHCRMVDPTS  60
RMRIRPARDG HIAAVVDASN GSESWAAASA EEHPSSRSDE QSEEADEDGD GNAEAVGAAV  120
LLFSPPPPAV AVATLLLFPS SDAGAAAAGT SLFKTVMVRC GHCSSLLTVN IRGLLLPTSA  180
AATVATAPPP PPPPPPPAAA HFPHSLNLAP PANPPHHHSL LDEISTASSP TQLLAA