PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA09G10990.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

C2H2

Protein Properties

Length: 170aa MW: 18322 Da PI: 8.4732

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA09G10990.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.5	2.4e-05	77	99	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F ++ L H++ H ONIVA09G10990.1 77 FTCTYCDKKFYSSQALGGHQNAH 99 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 170 aa Download sequence
MLTTFSAFSQ EGRAVAATSG GGGPFTGWCS SRRRRPEAPA AMDRYNGGGG GGEEGDEQLD 60 LNLSLQPSQA NEPPGYFTCT YCDKKFYSSQ ALGGHQNAHK FERSVAKRTR ELAAARRQQA 120 ADEEARRGAG TTTTREPTGN ASSSYQRASP PAEARRRDLL TDDIDLSLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57520.1	5e-15	C2H2 family protein

Link Out ? help Back to Top
Ensembl	ONIVA09G10990.1