PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA09G13640.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 205aa    MW: 21908.8 Da    PI: 8.0628
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA09G13640.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.51.5e-152978254
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                     rr+h+e+Er+RR+riN  +++Lr l+P+a   +  +++Ka+ L ++v+Y+++L
  ONIVA09G13640.1 29 RRSHSEAERKRRERINAHLDTLRGLVPSA---SRVRMDKAALLGEVVRYVRKL 78
                     99***************************...9******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MVAARSGDDA ELGLDVECLA AAPRWTRARR SHSEAERKRR ERINAHLDTL RGLVPSASRV  60
RMDKAALLGE VVRYVRKLRS EAAGSAAVVP GEGDEVVVEE EEVEAARRVK ASVCCADRPG  120
LMSELGDAER SVSARAVRAE IATVGGRTRS VLELDVARTA AAGGGSNGAS QLPALQAALR  180
AVIMSQEELL AVESYKQRRF SADFA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13641ERKRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.14e-16bHLH family protein