PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA09G14290.3

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 495aa MW: 53147.4 Da PI: 7.1727

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA09G14290.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.5	1.4e-09	324	372	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq ONIVA09G14290.3 324 NSHSLAERLRREKISERMKLLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 372 58***********************9....556***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MPCVEAGQRC RAQYWQKEGL PSGDTRSWMA KEIYEEKKRR AGRDRRQALL KERKLGIRSL 60 EPRLGDSMDM SESSEKGMES NASSGPGNGI PVEWQSQFSS AFACQPSVAA QHQQHAMMDS 120 FAAASAGLWA SSDVVSAMSS AAPPRGAGFL APVPGFLQQG LGHFPVDSGF IERAARSTCF 180 GGGMMAGGPY GAADQAMGDA FGGTAEGLMD HHRNVGNDKA EEFAGNGHDE VPSSEVAGGD 240 CSSKGSDSKK RRRPNEVMGT DQVHSSNLPS DSANESVHSK DKGEESSPAT TNGGKSKGKG 300 AKETSESQKE EYIHVRARRG QATNSHSLAE RLRREKISER MKLLQDLVPG CSKVTGKAVM 360 LDEIINYVQS LQRQVEFLSM KLATVNPRLD LNIEGLLSKD LLRFPGVPSS SIGFSPEMMH 420 PQLQLSQPGL IHGGTAGMAN PDVFRRIIQA QLGAKDGSQM PHSLNGSFSD VSQMAYPSLG 480 SQDLSIRPSQ DGFQM

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MPCVEAGQRC RAQYWQKEGL PSGDTRSWMA KEIYEEKKRR AGRDRRQALL KERKLGIRSL  60
EPRLGDSMDM SESSEKGMES NASSGPGNGI PVEWQSQFSS AFACQPSVAA QHQQHAMMDS  120
FAAASAGLWA SSDVVSAMSS AAPPRGAGFL APVPGFLQQG LGHFPVDSGF IERAARSTCF  180
GGGMMAGGPY GAADQAMGDA FGGTAEGLMD HHRNVGNDKA EEFAGNGHDE VPSSEVAGGD  240
CSSKGSDSKK RRRPNEVMGT DQVHSSNLPS DSANESVHSK DKGEESSPAT TNGGKSKGKG  300
AKETSESQKE EYIHVRARRG QATNSHSLAE RLRREKISER MKLLQDLVPG CSKVTGKAVM  360
LDEIINYVQS LQRQVEFLSM KLATVNPRLD LNIEGLLSKD LLRFPGVPSS SIGFSPEMMH  420
PQLQLSQPGL IHGGTAGMAN PDVFRRIIQA QLGAKDGSQM PHSLNGSFSD VSQMAYPSLG  480
SQDLSIRPSQ DGFQM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	3e-63	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA09G14290.3