PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA09G14370.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 970aa MW: 105825 Da PI: 8.2385

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA09G14370.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	54.4	2.2e-17	698	747	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f+ LrellP++ ++K +Ka+ L +++eYI+ Lq ONIVA09G14370.1 698 RSKHSATEQRRRSKINDRFQILRELLPHS----DQKRDKATFLLEVIEYIRFLQ 747 889***********************9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 970 aa Download sequence
MGIQGNKATT REHDFLSLYT TAAKDPSLQL HDAKPPPPSQ GFFLRTHDFL QPLEKPTPAP 60 APPPTSQLQL QQQQQQQAFP GGIGTFSISH VAGARPVAAA VVKAEPTPFV LWGQPAAAAA 120 AHPVAALGHH HHHHHQWTLP FAGVGQVAAT AARQQQERKG RIGGGGFMDS GSRSSGGAGF 180 DDDDGVAARR EVSSSLKERR REGRGEEGRR RSRELMEMEM EMYSRCARPS HIHQLHARLV 240 VSGRLRCTSP SLALALLRAA CRVRASPCLR PLAHHLLDHI PRPHPHLLHA ASRLAYRLRL 300 PSLALRHYVA LRTHHPVFLP PAAAIADMLK SVRGRAAHAH ALRVTAHAGD TRFLDNTLIA 360 MYFACGDVQR ARLVFEGMCD RDVISWTSLI SGLVQNGSPL QGIQQFATMM HCDVRPDFVV 420 LVTIAKAFME LDNLPGAESA HSLVVKGGFH DEQDVMITLT AMYASFGCLV AARALFDMVP 480 PQQDMKLAGV RPNDVTFLGL LSACNHAGAV EKGWSYFHSM KPDYGIEPQH QHYACVVDLL 540 SRAGQLDRAY QFILNMPIKP EMTVWGALLH GCKMHGHSNM AMAECAAQHI FELEQSNAGH 600 YVQLANMYAS AGMWSQVAGM RVTMRERGVT KATGFSFIEV DGKVHSFHAW DHSHPRATEI 660 FAMLCLLSPT PTGGEMRVDG KGGSCSGSGT DQRPSSPRSK HSATEQRRRS KINDRFQILR 720 ELLPHSDQKR DKATFLLEVI EYIRFLQEKV QKFEASVPEW NQENAKILPW SKGQNPGDDL 780 PDPSQFIRNG SSSGYNFTGK PDDNHNMVTS AAASGAQELV ETDHAASVSY RSAETPTNIT 840 NNVTSQAQAQ WASPAGVDDC AMNSEMLNNQ QLAIDEGTIS LSSQYSQQLL GTLTHALESS 900 GVDLSQASIS VQINLGKRAV KRPGADGSSS SKELPSTSAN NENMGHQLTM LGGGTEELPH 960 PTKRHKSGNS

Sequence ? help Back to Top

Protein Sequence Length: 970 aa Download sequence

MGIQGNKATT REHDFLSLYT TAAKDPSLQL HDAKPPPPSQ GFFLRTHDFL QPLEKPTPAP  60
APPPTSQLQL QQQQQQQAFP GGIGTFSISH VAGARPVAAA VVKAEPTPFV LWGQPAAAAA  120
AHPVAALGHH HHHHHQWTLP FAGVGQVAAT AARQQQERKG RIGGGGFMDS GSRSSGGAGF  180
DDDDGVAARR EVSSSLKERR REGRGEEGRR RSRELMEMEM EMYSRCARPS HIHQLHARLV  240
VSGRLRCTSP SLALALLRAA CRVRASPCLR PLAHHLLDHI PRPHPHLLHA ASRLAYRLRL  300
PSLALRHYVA LRTHHPVFLP PAAAIADMLK SVRGRAAHAH ALRVTAHAGD TRFLDNTLIA  360
MYFACGDVQR ARLVFEGMCD RDVISWTSLI SGLVQNGSPL QGIQQFATMM HCDVRPDFVV  420
LVTIAKAFME LDNLPGAESA HSLVVKGGFH DEQDVMITLT AMYASFGCLV AARALFDMVP  480
PQQDMKLAGV RPNDVTFLGL LSACNHAGAV EKGWSYFHSM KPDYGIEPQH QHYACVVDLL  540
SRAGQLDRAY QFILNMPIKP EMTVWGALLH GCKMHGHSNM AMAECAAQHI FELEQSNAGH  600
YVQLANMYAS AGMWSQVAGM RVTMRERGVT KATGFSFIEV DGKVHSFHAW DHSHPRATEI  660
FAMLCLLSPT PTGGEMRVDG KGGSCSGSGT DQRPSSPRSK HSATEQRRRS KINDRFQILR  720
ELLPHSDQKR DKATFLLEVI EYIRFLQEKV QKFEASVPEW NQENAKILPW SKGQNPGDDL  780
PDPSQFIRNG SSSGYNFTGK PDDNHNMVTS AAASGAQELV ETDHAASVSY RSAETPTNIT  840
NNVTSQAQAQ WASPAGVDDC AMNSEMLNNQ QLAIDEGTIS LSSQYSQQLL GTLTHALESS  900
GVDLSQASIS VQINLGKRAV KRPGADGSSS SKELPSTSAN NENMGHQLTM LGGGTEELPH  960
PTKRHKSGNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	5e-50	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA09G14370.1