PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA09G14370.3

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 495aa MW: 52974.5 Da PI: 7.232

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA09G14370.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	55.6	9.3e-18	223	272	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f+ LrellP++ ++K +Ka+ L +++eYI+ Lq ONIVA09G14370.3 223 RSKHSATEQRRRSKINDRFQILRELLPHS----DQKRDKATFLLEVIEYIRFLQ 272 889***********************9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MGIQGNKATT REHDFLSLYT TAAKDPSLQL HDAKPPPPSQ GFFLRTHDFL QPLEKPTPAP 60 APPPTSQLQL QQQQQQQAFP GGIGTFSISH VAGARPVAAA VVKAEPTPFV LWGQPAAAAA 120 AHPVAALGHH HHHHHQWTLP FAGVGQVAAT AARQQQERKG RIGGGGFMDS GSRSSGGAGF 180 DDDDGVAARR EVSSSLKELT VRVDGKGGSC SGSGTDQRPS SPRSKHSATE QRRRSKINDR 240 FQILRELLPH SDQKRDKATF LLEVIEYIRF LQEKVQKFEA SVPEWNQENA KILPWSKGQN 300 PGDDLPDPSQ FIRNGSSSGY NFTGKPDDNH NMVTSAAASG AQELVETDHA ASVSYRSAET 360 PTNITNNVTS QAQAQWASPA GVDDCAMNSE MLNNQQLAID EGTISLSSQY SQQLLGTLTH 420 ALESSGVDLS QASISVQINL GKRAVKRPGA DGSSSSKELP STSANNENMG HQLTMLGGGT 480 EELPHPTKRH KSGNS

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MGIQGNKATT REHDFLSLYT TAAKDPSLQL HDAKPPPPSQ GFFLRTHDFL QPLEKPTPAP  60
APPPTSQLQL QQQQQQQAFP GGIGTFSISH VAGARPVAAA VVKAEPTPFV LWGQPAAAAA  120
AHPVAALGHH HHHHHQWTLP FAGVGQVAAT AARQQQERKG RIGGGGFMDS GSRSSGGAGF  180
DDDDGVAARR EVSSSLKELT VRVDGKGGSC SGSGTDQRPS SPRSKHSATE QRRRSKINDR  240
FQILRELLPH SDQKRDKATF LLEVIEYIRF LQEKVQKFEA SVPEWNQENA KILPWSKGQN  300
PGDDLPDPSQ FIRNGSSSGY NFTGKPDDNH NMVTSAAASG AQELVETDHA ASVSYRSAET  360
PTNITNNVTS QAQAQWASPA GVDDCAMNSE MLNNQQLAID EGTISLSSQY SQQLLGTLTH  420
ALESSGVDLS QASISVQINL GKRAVKRPGA DGSSSSKELP STSANNENMG HQLTMLGGGT  480
EELPHPTKRH KSGNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	4e-52	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA09G14370.3