PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA09G14690.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NF-YC
Protein Properties Length: 201aa    MW: 21334.3 Da    PI: 5.2621
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA09G14690.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC169.83.3e-53591621101
            NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdf 91 
                      ql++fw++q   ie +tdfknh+lPlarikki+kadedv+mi+aeaPv++++ace+filelt r w haeenkrrtl+ksdiaaa++rt++fdf
  ONIVA09G14690.1  59 QLQMFWAEQyreIEATTDFKNHNLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHRGWAHAEENKRRTLQKSDIAAAIARTEVFDF 152
                      89******99999********************************************************************************* PP

            NF-YC  92 lvdivprdel 101
                      lvdivprd+ 
  ONIVA09G14690.1 153 LVDIVPRDDA 162
                      *******986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MDPTKSSTPP PVMGAPVGFP PGAYPPPPPA GAAAAAYAQQ LYAPPAAAAA QQAAAAQQQL  60
QMFWAEQYRE IEATTDFKNH NLPLARIKKI MKADEDVRMI AAEAPVVFAR ACEMFILELT  120
HRGWAHAEEN KRRTLQKSDI AAAIARTEVF DFLVDIVPRD DAKDADAAAA AAAAAAAAGI  180
PRPAAGVPAT DPLAYYYVPQ Q
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1132138RRTLQKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56170.13e-57NF-YC family protein