PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA09G15020.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family C2H2
Protein Properties Length: 131aa    MW: 13510.3 Da    PI: 11.7295
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA09G15020.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.69.6e-052143123
                     EEETTTTEEESSHHHHHHHHHHT CS
          zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                     ++C+ C+ksF++   L  H  +H
  ONIVA09G15020.1 21 FECKTCNKSFPSLQGLGGHRTSH 43
                     89**********99998888877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    
MAPTSSSTPA GSRALAAEGV FECKTCNKSF PSLQGLGGHR TSHTRLQAKL LSDPAAAAAE  60
RDRARIHECA ACAGSSSPWG RRSAATCAGT GARRARRPSC SRPPTSTTRA APPRTFGPLG  120
QLPLRPCLPA S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53600.11e-10C2H2 family protein