PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA09G15100.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

C2H2

Protein Properties

Length: 442aa MW: 46745.6 Da PI: 6.7049

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA09G15100.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.8	4.1e-05	273	292	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ ONIVA09G15100.1 273 FSCPVCFKTFNRYNNMQMHM 292 89*****************9 PP
2	zf-C2H2	12.4	0.00046	359	379	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C +Cgk F k + ++H +++ ONIVA09G15100.1 359 CRKCGKAFAVKGDWRTHEKNC 379 *****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MENPYYASFL KNHHRRYCFS TPPSPSPSPA GAYSSSSFPF FPTAGVTSTA AATPPTTTAP 60 PSPPLREALP LLSLTPASRG GTTAAQERAR QRGEEDCTDD DDGAEEEGAD EEDVPSSTPG 120 GGGGGGGDRH HQLRRRRAGR LFADLNTKAA AGDPMDVEGS GSGCCAAEAA AAGDDDADVT 180 VALHIGLPSP TAAADLISGL SSAAGRRSST ARRDEEEDEA EEAGGASRDD GDGGDAADAA 240 APLGFASTPI GRLNKGQYWI PTPSQILIGP TQFSCPVCFK TFNRYNNMQM HMWGHGSQYR 300 KGPESLRGIQ PTAMLRLPCY CCAAGCRNNI DHPRAKPLKD FRTLQTHYKR KHGLKPFLCR 360 KCGKAFAVKG DWRTHEKNCG KLWYCLCGSE FKHKRSLKDH ARAFGHGHGA LGGAAALDDD 420 DDGAVSDLDH DSSSTAPAAR SL

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MENPYYASFL KNHHRRYCFS TPPSPSPSPA GAYSSSSFPF FPTAGVTSTA AATPPTTTAP  60
PSPPLREALP LLSLTPASRG GTTAAQERAR QRGEEDCTDD DDGAEEEGAD EEDVPSSTPG  120
GGGGGGGDRH HQLRRRRAGR LFADLNTKAA AGDPMDVEGS GSGCCAAEAA AAGDDDADVT  180
VALHIGLPSP TAAADLISGL SSAAGRRSST ARRDEEEDEA EEAGGASRDD GDGGDAADAA  240
APLGFASTPI GRLNKGQYWI PTPSQILIGP TQFSCPVCFK TFNRYNNMQM HMWGHGSQYR  300
KGPESLRGIQ PTAMLRLPCY CCAAGCRNNI DHPRAKPLKD FRTLQTHYKR KHGLKPFLCR  360
KCGKAFAVKG DWRTHEKNCG KLWYCLCGSE FKHKRSLKDH ARAFGHGHGA LGGAAALDDD  420
DDGAVSDLDH DSSSTAPAAR SL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-107	C2H2 family protein

Link Out ? help Back to Top
Ensembl	ONIVA09G15100.1