PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA09G17720.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 284aa    MW: 29759.5 Da    PI: 6.5161
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA09G17720.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.73.7e-12111156454
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      +h e+Er+RR+++N +f  Lr  +P+       +++Ka+ L  A  YI +L
  ONIVA09G17720.1 111 SHVEAERQRREKLNRRFCDLRAAVPTV-----SRMDKASLLADAAAYIAEL 156
                      89************************6.....49**************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MDELLSPCSS FSPPSPSSMF STGAAAAAAH AVLEFTSCEV PDEWLMGDVV MAKNEEDVGG  60
GELWPVFAGG SLSPDSELSE LPRSFEAAAA QRPAKRRGRK PGPRPDGPTV SHVEAERQRR  120
EKLNRRFCDL RAAVPTVSRM DKASLLADAA AYIAELRARV ARLESDARQA AAARFEPSSC  180
GGGGNASYHG GGGGGGAAPG LDEAVEVRKM GRDAAAVRVT TTGARHAPAR LMGALRSLEL  240
PVQHACVMRV HGATTVQEIL VDVPAALQDG DALRAALLQR LQDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46760.12e-10bHLH family protein