PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA09G17880.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 218aa    MW: 23238.9 Da    PI: 4.8485
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA09G17880.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.97e-153187155
              AP2  1 sgykGVrwdkkrgr......WvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                     + y+GVr++   gr      Wv+e+r+p   g +  r +lg+f tae Aa+a++aa+++l+g
  ONIVA09G17880.1 31 PVYRGVRRRG--GRpgaagrWVCEVRVP---GaRGSRLWLGTFATAEAAARAHDAAALALRG 87
                     679***8765..55556666*******9...6666*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MEVEEAAYRT VWSEPPKRPA GRTKFRETRH PVYRGVRRRG GRPGAAGRWV CEVRVPGARG  60
SRLWLGTFAT AEAAARAHDA AALALRGRAA CLNFADSAWR MPPVPASAAL AGARGVRDAV  120
AVAVEAFQRQ SAAPSSPAET FADDGDEEED NKDVLPVAAA EVFDAGAFEL DDGFRFGGMD  180
AGSYYASLAQ GLLVEPPAAG AWWEDGELAG SDMPLWSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.17e-13ERF family protein