PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA09G17920.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 226aa    MW: 23720.8 Da    PI: 10.1033
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA09G17920.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22e-182676256
              AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                     ++ GVr+++ +grWvAeI+d      +r r +lg+f+taeeAa+ +++a++ l+ge
  ONIVA09G17920.1 26 RFVGVRQRP-SGRWVAEIKD----SaQRVRLWLGTFDTAEEAARSYDEAARVLRGE 76
                     589******.7*********....4456*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MAAQESGRMA TATGGVVAAK ARRGRRFVGV RQRPSGRWVA EIKDSAQRVR LWLGTFDTAE  60
EAARSYDEAA RVLRGEHART NFVARGGDAA AAPARARLSR NLRHVMARAA AGGRASAPCA  120
AAGVGAGGEQ FALAAVFRRC MQPAAATQQQ CGAADTTVHV KNAVQPSFVV PRRTEAPPPP  180
TTPMLLAEDV LVDFDDDGLG SAGVETAFMV SSSLIVPSSF VIDDDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.18e-22ERF family protein