PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA09G18120.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family HD-ZIP
Protein Properties Length: 870aa    MW: 91535.1 Da    PI: 6.03
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA09G18120.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox67.22.1e-21122177156
                      TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
         Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                      +++ +++t++q++eLe++F+++++p++++r eL+++l+L+ rqVk+WFqNrR+++k
  ONIVA09G18120.1 122 KKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRLNLESRQVKFWFQNRRTQMK 177
                      688999***********************************************999 PP
2START177.57.8e-563475771205
                      HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEE CS
            START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaet 81 
                      ela++a++elvk a+ +ep+W  s     e +n+de+ + f++  +     + +ea r+sg+ +  +++lv +l+d + +W+e+++    +a+t
  ONIVA09G18120.1 347 ELALAAMDELVKVAQMDEPLWLPSLdggfETLNYDEYHRAFARVVGqcpagYVSEATRESGIAIISSVDLVDSLMDAP-RWSEMFPcvvaRAST 439
                      5899*************************************8866699******************************.*************** PP

                      EEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--........-TTSEE-EESSEEEEEEEECTCE CS
            START  82 levissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe.......sssvvRaellpSgiliepksngh 161
                      ++ issg      g +qlm aelq+lsplvp R++vf+R+++q+ +g w++vdvSvd    p +       sss++ ++llp+g++++++ ng+
  ONIVA09G18120.1 440 TDIISSGmggtrsGSIQLMHAELQVLSPLVPiREVVFLRFCKQHAEGLWAVVDVSVDAVLRPDQnggggssSSSYMGCRLLPTGCIVQDMNNGY 533
                      *********************************************************988877667788889********************** PP

                      EEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS
            START 162 skvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqce 205
                      skvtwv h+++++   h+l+r+l++sg+a ga++w+a lqrqc+
  ONIVA09G18120.1 534 SKVTWVVHAEYDETAAHQLYRPLLRSGQALGARRWLASLQRQCQ 577
                      *******************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 870 aa     Download sequence    
MSFGGMFDGA GSGVFSYDAG GGGGGGVHNS RLLPTPPVPK PGGGFAAPGL SLGLQTMDGS  60
QLGDVNRSLA MMGNGGSGSG GDGDSLGRGR EEENDSRSGS DNLDGASGDE LDPDNSNPRK  120
KKKRYHRHTP QQIQELEAVF KECPHPDEKQ RMELSRRLNL ESRQVKFWFQ NRRTQMKTQI  180
ERHENALLRQ ENDKLRAENM TIREAMRNPM CASCGGAAVL GEVSLEEQHL RIENARLKDE  240
LDRVCALAGK FLGRPISSIS SPGPPSLQAC SGLELGVGSN GGFGLGALGA SAAMQSIPDL  300
MGGSSGLTGG PVGSAAMRLP AGIGGLDGAM HAAAADGGAI DRAVLLELAL AAMDELVKVA  360
QMDEPLWLPS LDGGFETLNY DEYHRAFARV VGQCPAGYVS EATRESGIAI ISSVDLVDSL  420
MDAPRWSEMF PCVVARASTT DIISSGMGGT RSGSIQLMHA ELQVLSPLVP IREVVFLRFC  480
KQHAEGLWAV VDVSVDAVLR PDQNGGGGSS SSSYMGCRLL PTGCIVQDMN NGYSKVTWVV  540
HAEYDETAAH QLYRPLLRSG QALGARRWLA SLQRQCQYLA ILCSNSLPAR DHAAITPVGR  600
RSMLKLAQRM TDNFCAGVCA SAAQKWRRLD EWRGEGGGGG GGGGGDGEDK VRMMARHSVG  660
APGEPPGVVL SATTSVRLPG TLPQRVFDYL RDEQRRGDWD ILANGEAMQE MDHIAKGQHH  720
GNAVSLLRPN ATSGNQNNML ILQETCTDSS GSLVVYAPVD VQSMHVVMNG GDSAYVSLLP  780
SGFAILPDGH NNGASPSPAE VGSGASPNSA AGGGGGSNNT GSLVTVAFQI LVNNLPTAKL  840
TVESVDTVSN LLSCTIQKIK SALQASIISP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1119124RKKKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein