PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA09G19860.3

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Nin-like

Protein Properties

Length: 837aa MW: 92198.5 Da PI: 6.6949

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA09G19860.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.7	5.5e-29	522	572	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl++l++yF++++kdAAk+Lgvc+T+LKriCRq+GI+RWP+Rkik++ ONIVA09G19860.3 522 EKTVSLQVLRQYFAGSLKDAAKSLGVCPTTLKRICRQHGINRWPSRKIKKV 572 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 837 aa Download sequence
MEEGDPQPSI SLARTPSEGT AAAVDLDLLE QLLSADNAWL EVAANTSRSP NFFATPSNCL 60 TDASVATTTP ANSWWIQPSG ASTPVRERFD QALAYIRETQ SDADVLVQLW VPVKGNDGQL 120 VLTTSGQPFT LDQRSNSLIQ FREVSTKYQF SADVASGSSP GLPGRVFIGR LPEWSPDVRY 180 FTSYEYPRIS HAQYLDVHGT MGLPVFERGN YSCLGVIELI MTKQKLNFTS ELNTICSALQ 240 AVNLTSTEVS SIPRTKLNSA SYKDALPEIL EVLRAACITH KLPLAQTWVT CAQQGKRGSR 300 HSDENYKYCI STIDAACYVN EPQMQSFHEA CSEHHLLRGQ GVAGKAFTTN QPCFLPDIGS 360 STKLEYPLSH HAKIFNLKGA VAIRLRCTRT GIADFVLEFF LPTDCEVLEE QKAVLDSLSG 420 TMRSVCQTLR VVTDKEMEDE AMREMNELNS FSPRGKNKVE ELSFGDNKRE DREETSWTTL 480 VGTSQKGSDL AELHTHGGQG SSQAGDQTSK EGSKVKRRTK TEKTVSLQVL RQYFAGSLKD 540 AAKSLGVCPT TLKRICRQHG INRWPSRKIK KVDHSLRKLQ QIIDSVHGAE TAFQLNTLYK 600 DLTNTSVSSD NNLSGSVTVP LANQNNLDFE KHQHHRLSSN IPSTSLSHSS CSQSSDSSPS 660 CSGGATKHSP QVGADQVRSG CLPQHSPVQT LQTEAASINE HFSGQEAPID LLQDVAEKAN 720 GEQHMSQSPS SPKQTANVGM RVKVTFGSEK VRFRLKPECD FQELKQEISK RLGIVDMNSL 780 IVKYLDDDSE WVLMTCDADL HECFHVYKLA DIQTIKISVH LAASPTTRIT IGHTGFS

Sequence ? help Back to Top

Protein Sequence Length: 837 aa Download sequence

MEEGDPQPSI SLARTPSEGT AAAVDLDLLE QLLSADNAWL EVAANTSRSP NFFATPSNCL  60
TDASVATTTP ANSWWIQPSG ASTPVRERFD QALAYIRETQ SDADVLVQLW VPVKGNDGQL  120
VLTTSGQPFT LDQRSNSLIQ FREVSTKYQF SADVASGSSP GLPGRVFIGR LPEWSPDVRY  180
FTSYEYPRIS HAQYLDVHGT MGLPVFERGN YSCLGVIELI MTKQKLNFTS ELNTICSALQ  240
AVNLTSTEVS SIPRTKLNSA SYKDALPEIL EVLRAACITH KLPLAQTWVT CAQQGKRGSR  300
HSDENYKYCI STIDAACYVN EPQMQSFHEA CSEHHLLRGQ GVAGKAFTTN QPCFLPDIGS  360
STKLEYPLSH HAKIFNLKGA VAIRLRCTRT GIADFVLEFF LPTDCEVLEE QKAVLDSLSG  420
TMRSVCQTLR VVTDKEMEDE AMREMNELNS FSPRGKNKVE ELSFGDNKRE DREETSWTTL  480
VGTSQKGSDL AELHTHGGQG SSQAGDQTSK EGSKVKRRTK TEKTVSLQVL RQYFAGSLKD  540
AAKSLGVCPT TLKRICRQHG INRWPSRKIK KVDHSLRKLQ QIIDSVHGAE TAFQLNTLYK  600
DLTNTSVSSD NNLSGSVTVP LANQNNLDFE KHQHHRLSSN IPSTSLSHSS CSQSSDSSPS  660
CSGGATKHSP QVGADQVRSG CLPQHSPVQT LQTEAASINE HFSGQEAPID LLQDVAEKAN  720
GEQHMSQSPS SPKQTANVGM RVKVTFGSEK VRFRLKPECD FQELKQEISK RLGIVDMNSL  780
IVKYLDDDSE WVLMTCDADL HECFHVYKLA DIQTIKISVH LAASPTTRIT IGHTGFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	0.0	Nin-like family protein

Link Out ? help Back to Top
Ensembl	ONIVA09G19860.3