PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G01090.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family BBR-BPC
Protein Properties Length: 234aa    MW: 26026.2 Da    PI: 10.6534
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G01090.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind295.32.4e-9040234107301
        GAGA_bind 107 sidslqqlsepqledsave.lreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesad.erskaekksidlvl 198
                      ++++  +  +pq ++++ +  ++ee+++ + +ee++++++e + +kkrq++++pk+++ kk+kk +++++++ +++sa+ +r++ + k+i++v+
  ONIVA10G01090.1  40 MMQHQPE-PQPQPQPPPSPpHPKEECISLPLMEENVPVISEPPPPKKRQQGRQPKVPRPKKPKK-PAAPREDGAPPSAPaPRRRGPMKNIGMVI 131
                      4443333.44777777777799******************************************.9999********999************** PP

        GAGA_bind 199 ngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkH 292
                      ng++lD s++P+ +CsCtGa++qCY+WG+GGWqSaCCttt+S+yPLP+stkr gaRiagrKmS+gafkk+LekLa+eGy+l+np+DLk++WAkH
  ONIVA10G01090.1 132 NGIDLDLSRIPTSICSCTGAPQQCYRWGAGGWQSACCTTTVSTYPLPMSTKRHGARIAGRKMSHGAFKKVLEKLAGEGYNLNNPIDLKTFWAKH 225
                      ********************************************************************************************** PP

        GAGA_bind 293 Gtnkfvtir 301
                      Gtnkfvtir
  ONIVA10G01090.1 226 GTNKFVTIR 234
                      ********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MPPPPAATEA PPSMPMNFVR NDIWMHPQQQ HHHHPREPKM MQHQPEPQPQ PQPPPSPPHP  60
KEECISLPLM EENVPVISEP PPPKKRQQGR QPKVPRPKKP KKPAAPREDG APPSAPAPRR  120
RGPMKNIGMV INGIDLDLSR IPTSICSCTG APQQCYRWGA GGWQSACCTT TVSTYPLPMS  180
TKRHGARIAG RKMSHGAFKK VLEKLAGEGY NLNNPIDLKT FWAKHGTNKF VTIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.11e-59BBR-BPC family protein