PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G02490.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family B3
Protein Properties Length: 245aa    MW: 27476.7 Da    PI: 10.8622
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G02490.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.41.3e-13981711897
                      --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
               B3  18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                      +p + a+++++++     l+l++++g + ++++  +   ++ ++t+GWkeF++a gL++g++++F++++rs++  +v+++
  ONIVA10G02490.1  98 VPSTLATAYEMQHGD--SLRLKTSHGLKIKIRI--KEAASTLYMTTGWKEFAEATGLETGETILFRMSSRSKA--RVMLL 171
                      688889999888655..6***************..999999*************************9988777..55555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MDESYSLFRK IGNEQRGREM LAFRCVACTA IVSLYKCQGM RPLLPQRDAS TPPQEHQSHI  60
PSQSTVRLSD LRKIITDKQR QVTHKKGPVP RRLFFRPVPS TLATAYEMQH GDSLRLKTSH  120
GLKIKIRIKE AASTLYMTTG WKEFAEATGL ETGETILFRM SSRSKARVML LNRQCLIRCP  180
VKTPSTTSSD KNRSLSPSDQ LTRASTCAHP STSKSIPPLR NGTGSTKRSI ADTSFCHQLK  240
LTAEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18960.11e-08B3 family protein