PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G02990.3
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 295aa    MW: 32439.2 Da    PI: 5.8585
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G02990.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.35.5e-08128172554
                      HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      h +rEr+RR+++ ++++ L  ++ ++      K +K +i++ A  YI++L
  ONIVA10G02990.3 128 HMMRERQRREKLSQSYADLYAMVSSR-----SKGDKNSIVQSAAIYIHEL 172
                      889**********************8.....6999999*********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MQMESYYGAF HADEAAFFFP HHVPASPELP FGLIASPEPE QAAAEARQSA FQEYGGAVHA  60
GAPAAAGAVT TGGTNIHRRV MDVLGRMGGG GGGGEKGEGE EMEEEEEVPQ RRRRGQGADV  120
ESSRGFRHMM RERQRREKLS QSYADLYAMV SSRSKGDKNS IVQSAAIYIH ELKVARDQLQ  180
RRNEELKAQI MGHDEQQPCV TVQFEVDEPS SSIVSMIAAL RRLKGMSVKA RGIRSSMSGN  240
RLWTEMNVET TIAACEVEKA VEEALKEVER NQPDSDAPFP GSKGWTQTSH VQNVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.12e-18bHLH family protein