PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G05120.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family B3
Protein Properties Length: 317aa    MW: 35777.8 Da    PI: 10.5863
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G05120.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.61.6e-11961671895
                      --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
               B3  18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                      lp + +++++g    +k ltl +++++  +v+l  +k++++++++kGWk+Fv+  +L++g  v F++++ s+  l + 
  ONIVA10G05120.1  96 LPPEIVARCNGH--DGKHLTLVTRNSKPVNVRL--EKRGQSFYISKGWKKFVELTDLRVGQCVRFSVSSPST--LDLL 167
                      677777777655..4568***************..*******************************654333..4444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MEGSLSGGAD QRWARRCERG WSSSSSRRHP PRPSKPQANK EKKGAIQRVV QAQCSLSTSL  60
RLTAHVTSSI VHEQSSNIRY GENRKHGQRY AYHEPLPPEI VARCNGHDGK HLTLVTRNSK  120
PVNVRLEKRG QSFYISKGWK KFVELTDLRV GQCVRFSVSS PSTLDLLILD KHGTSLAIPP  180
SKRDLKLKSK RSTHQDSKGH PSNTDPGPSR IINRRVTKSA NNKPKFADLC FCAENYFSKR  240
YPIDHLEQLM TGRTEDIEVQ TLVGPSVNMV LHTSTDHRCN LKKGWTDFAL SNGIKLNTVC  300
IFHFYKTTHL GVIVDIF