PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G05120.2
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family B3
Protein Properties Length: 297aa    MW: 33595.3 Da    PI: 10.719
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G05120.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.81.4e-11961671895
                      --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
               B3  18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                      lp + +++++g    +k ltl +++++  +v+l  +k++++++++kGWk+Fv+  +L++g  v F++++ s+  l + 
  ONIVA10G05120.2  96 LPPEIVARCNGH--DGKHLTLVTRNSKPVNVRL--EKRGQSFYISKGWKKFVELTDLRVGQCVRFSVSSPST--LDLL 167
                      677777777655..4568***************..*******************************654333..4444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MEGSLSGGAD QRWARRCERG WSSSSSRRHP PRPSKPQANK EKKGAIQRVV QAQCSLSTSL  60
RLTAHVTSSI VHEQSSNIRY GENRKHGQRY AYHEPLPPEI VARCNGHDGK HLTLVTRNSK  120
PVNVRLEKRG QSFYISKGWK KFVELTDLRV GQCVRFSVSS PSTLDLLILD KHGTSLAIPP  180
SKRDLKLKSK RSTHQDSKGH PSNTDPGPSR IINRRYFSKR YPIDHLEQLM TGRTEDIEVQ  240
TLVGPSVNMV LHTSTDHRCN LKKGWTDFAL SNGIKLNTVC IFHFYKTTHL GVIVDIF