PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA10G07810.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 331aa MW: 34842.2 Da PI: 7.1384

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA10G07810.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	46.7	5.7e-15	112	163	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ ++++ + a+i+ A++Y+++L+ ONIVA10G07810.1 112 QRMTHIAVERNRRRQMNEYLAVLRSLMPPS---YAQRGDQASIVGGAINYVRELE 163 79**************************...*****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MALEAVVYSH GGHFGGYGGG LMGGAPAAPW DVFAAAAGGG GAGSWDDPGL FAAEASLDVI 60 QGVDEWEVDQ DQHASSSSKV AARPPVKAAA AAGKRKRRRA KAAKNREEIE SQRMTHIAVE 120 RNRRRQMNEY LAVLRSLMPP SYAQRGDQAS IVGGAINYVR ELEQLLQTLE ARRTIKDHID 180 GGAGESPSPF AGFFAFPQYS TATSGHGGGG DAHSRIVVKP AETTTTAAGG GAGAAIADIE 240 ASMVEGHASV KVQARRRPRQ LLKLVAGLHQ LGLTTLHLNV TTVAAMAMYS FSLKVEDGCK 300 LGSVEEIASA VHEILERMQE EQAFADAKTS L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	94	99	KRKRRR
2	95	99	RKRRR
3	113	124	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	8e-59	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA10G07810.1