PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G08670.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NF-YA
Protein Properties Length: 166aa    MW: 18332.8 Da    PI: 10.351
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G08670.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA75.79.1e-2467123158
        CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                      dep+YVNaKQy++I++RRq+R+ + +e+k+ ++ rk++l e+R+k+A+ R+Rg+gGrF
  ONIVA10G08670.1  67 DEPIYVNAKQYHAIIRRRQRRKIVGSEDKV-AAIRKRILVEARQKQAKLRRRGKGGRF 123
                      79****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MGFGESTQGN QRKLDGPGKV STELSLVNLE AKNLHPKPEC NQPLEHIPTK GMKCTPLLPL  60
PTEHADDEPI YVNAKQYHAI IRRRQRRKIV GSEDKVAAIR KRILVEARQK QAKLRRRGKG  120
GRFISIEHPL ELSMDDQISK NGGSASPSSS TVSENSSNVN GFTGDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.11e-17NF-YA family protein