PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G10740.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family MYB_related
Protein Properties Length: 259aa    MW: 29043.4 Da    PI: 10.6467
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G10740.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding223.7e-07182229348
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 
                       WT  E   lv++v ++G g+W+   r +     Rt  ++k++w+++l
  ONIVA10G10740.1 182 HWTIKEVTNLVQGVSKHGVGRWTELKRDFFstSIRTSVHLKDKWRNLL 229
                      6****************************99989************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MEKIRGCCGL RTVVSGWELC ISWAMEKAAA AACGWRKGLE EGEPEWEAME LEAAAPAIFP  60
ADGGGGGGRR SPAAWRIYFN QHMRMTSTIC YKGPKMKQTW TNGQSCSPAA EGSITVQTPT  120
YPILNLVDFI PKDGCKRGPR GARKRQTFPS RGARTRRAFP LQQLCFGTTR NKRCRLRKNN  180
DHWTIKEVTN LVQGVSKHGV GRWTELKRDF FSTSIRTSVH LKDKWRNLLK ACGIDFTSTA  240
KIRQYSAPRN PKSGSYPEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72650.22e-15MYB_related family protein