PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G10740.3
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family MYB_related
Protein Properties Length: 217aa    MW: 25106.2 Da    PI: 11.0605
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G10740.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.52.7e-07125172348
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 
                       WT  E   lv++v ++G g+W+   r +     Rt  ++k++w+++l
  ONIVA10G10740.3 125 HWTIKEVTNLVQGVSKHGVGRWTELKRDFFstSIRTSVHLKDKWRNLL 172
                      6****************************99989************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MVDVAKSLCL DISAVQIWRI YFNQHMRMTS TICYKGPKMK QTWTNGQSCS PAAEGSITVQ  60
TPTYPILNLV DFIPKDGCKR GPRGARKRQT FPSRGARTRR AFPLQQLCFG TTRNKRCRLR  120
KNNDHWTIKE VTNLVQGVSK HGVGRWTELK RDFFSTSIRT SVHLKDKWRN LLKACGIDFT  180
STAKGNAQKT MLWPLDKRLI EQITQLAYKH PYPRQKY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72650.24e-17MYB_related family protein