PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G11850.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family M-type_MADS
Protein Properties Length: 241aa    MW: 24568.6 Da    PI: 6.3935
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G11850.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF25.22.1e-086391043
                     HHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
           SRF-TF 10 qvtfskRrngilKKAeELSvLCdaevaviifsst 43
                       t+ k ++ ++  A ELS+LC+++va++ ++  
  ONIVA10G11850.1  6 DATYGKMQESLMEEARELSILCGVDVALLCAGGP 39
                     57999************************99865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MKMEEDATYG KMQESLMEEA RELSILCGVD VALLCAGGPG TGDGDGGGGG VGVGGGRSRL  60
LHQYGGGGAG AARVHGRGDG GRDREAEGAA LGLLDDGNAV NGDGGGPDLL HIPIQPGAPD  120
SVVVPVISHA QPIASSTGAD FADAPNGFLA MDVGGSLIKS ATTRRSARPM GSSSGTPTMA  180
NLDQIHYLVG GSAFSIDALE SPTLLVRCKT LRIAIQFMLP LRHGRFRANV PSNHRRTETK  240
S