PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA10G12510.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NAC

Protein Properties

Length: 366aa MW: 40894.9 Da PI: 6.8387

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA10G12510.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	163.6	7.2e-51	39	170	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 pGfrFhPtdeelv++yL++kv++k+l++ e+ike+diyk++PwdLp +++ ++ekewyfF+ r +ky+++ r+nr+t sg+Wkatg d++++s ONIVA10G12510.1 39 LPGFRFHPTDEELVTFYLRRKVARKSLSI-EIIKEMDIYKHDPWDLPnASTVGGEKEWYFFCLRGRKYRNSIRPNRVTGSGFWKATGIDRPIYS 131 69*************************.89***********556666899********************************** PP NAM 95 k.....kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +ge +glkk+Lv+y+g+a kg+ktdW+mhe+rl ONIVA10G12510.1 132 AavnsnSGESIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 170 9888888888*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MVTSKEFARD QAAMDQKIKS DVGEVVLAGD EEEDGDVVLP GFRFHPTDEE LVTFYLRRKV 60 ARKSLSIEII KEMDIYKHDP WDLPNASTVG GEKEWYFFCL RGRKYRNSIR PNRVTGSGFW 120 KATGIDRPIY SAAVNSNSGE SIGLKKSLVY YRGSAGKGTK TDWMMHEFRL PPAIAAADAS 180 PCMQEAEVWT ICRIFKRSIT YRKQQQQQAW RPPAPAPATV TVKAPPPGDS SSNTGSFESD 240 GGGDEFMNCG LTPAISQQQQ HGGRHQMMST MSCNGGYFFN DGIHHSHSHH KLHSQWGSLQ 300 MAPPEPKPEP EQKPLSSPAM TIAFHQNDHG FPAAAADFYK DGYLEEIARM MEVADPSPTG 360 FYDCRY

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MVTSKEFARD QAAMDQKIKS DVGEVVLAGD EEEDGDVVLP GFRFHPTDEE LVTFYLRRKV  60
ARKSLSIEII KEMDIYKHDP WDLPNASTVG GEKEWYFFCL RGRKYRNSIR PNRVTGSGFW  120
KATGIDRPIY SAAVNSNSGE SIGLKKSLVY YRGSAGKGTK TDWMMHEFRL PPAIAAADAS  180
PCMQEAEVWT ICRIFKRSIT YRKQQQQQAW RPPAPAPATV TVKAPPPGDS SSNTGSFESD  240
GGGDEFMNCG LTPAISQQQQ HGGRHQMMST MSCNGGYFFN DGIHHSHSHH KLHSQWGSLQ  300
MAPPEPKPEP EQKPLSSPAM TIAFHQNDHG FPAAAADFYK DGYLEEIARM MEVADPSPTG  360
FYDCRY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43000.1	2e-83	NAC family protein

Link Out ? help Back to Top
Ensembl	ONIVA10G12510.1