PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G12820.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 275aa    MW: 29421.3 Da    PI: 6.5105
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G12820.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH56.45.2e-18224270455
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       hn  ErrRRdriN+++  L+el+P++      K +Ka+iL +A+eY+ksLq
  ONIVA10G12820.1 224 VHNLSERRRRDRINEKMRALQELIPHC-----NKTDKASILDEAIEYLKSLQ 270
                      6*************************8.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MAICSTDNEL VELLWHNGGV VAQPQAAQAR VVSSSGRGQS ASVLTGDDTE TAAWFPDTLD  60
DALEKDLYTQ LWRSVTGDAF PAAAAAGPSS HHAPPPDLPP PAARPPMRSG IGSSWTGDIC  120
SAFCGSNHIP ETAAQRCRDA GAALPPERPR RSSTHDGAGT SSSAGSGSNF GASGLPSESA  180
SAHKRKGRED SDSRSEDAEC EATEETKSSS RRYGSKRRTR AAEVHNLSER RRRDRINEKM  240
RALQELIPHC NKTDKASILD EAIEYLKSLQ MQVQV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1216233KRRTRAAEVHNLSERRRR
2229234ERRRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.29e-29bHLH family protein