PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G18740.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family B3
Protein Properties Length: 312aa    MW: 33121.3 Da    PI: 10.0319
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G18740.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B393.91.1e-2935152199
                      EEEE-..-HHHHTT-EE--HHH.HTT...................---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT-- CS
               B3   1 ffkvltpsdvlksgrlvlpkkfaeeh...................ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLk 75 
                      f+kv tpsdv+k++rlv+pk++ae++                   g    ++  l++ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L 
  ONIVA10G18740.1  35 FEKVVTPSDVGKLNRLVIPKQHAERYfpldaaagaggggggggggG--GGKGLVLSFEDRTGKAWRFRYSYWNSSQSYVMTKGWSRFVKEKRLG 126
                      99******************************99999999998543..347789**************************************** PP

                      TT-EEEEEE-.SS.SEE..EEEEE-S CS
               B3  76 egDfvvFkld.gr.sefelvvkvfrk 99 
                      +gD+v F +  g+  +++l++ ++r+
  ONIVA10G18740.1 127 AGDTVSFGRGlGDaARGRLFIDFRRR 152
                      ********666888999999999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MEFTPISPPT RVAGGEEDSE RGAAAWAVVE KEHMFEKVVT PSDVGKLNRL VIPKQHAERY  60
FPLDAAAGAG GGGGGGGGGG GGKGLVLSFE DRTGKAWRFR YSYWNSSQSY VMTKGWSRFV  120
KEKRLGAGDT VSFGRGLGDA ARGRLFIDFR RRRQDAGSFM FPPTAAPPSH SHHHHQRHHP  180
PLPSVPLCPW RDYTTAYGGG YGYGYGGGST PASSRHVLFL RPQVPAAVVL KSVPVHVAAA  240
SAVQEAATTT RPKRVRLFGV NLDCPAAMDD DDDIAGAASR TAALSLLQLP SPSSSTSSST  300
AGKKMCSLDL GL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61970.16e-48B3 family protein