PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G19630.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family HB-other
Protein Properties Length: 109aa    MW: 11217.5 Da    PI: 10.562
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G19630.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox34.82.9e-1165109246
                      T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHH CS
         Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkv 46 
                      rk+ +++k+q  +Le+ F+k+++++ ++++ LA++l+L+ rqV v
  ONIVA10G19630.1  65 RKKLRLSKDQAAVLEDTFNKHNTLNPKQKAALARQLNLKPRQVEV 109
                      788899*************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 109 aa     Download sequence    
WAGTREAEGA EAAPAAAVGW TVRLLPVVSS PNSTLSSLSG KRGAPSAAAA AVGGSDDGDS  60
GDGSRKKLRL SKDQAAVLED TFNKHNTLNP KQKAALARQL NLKPRQVEV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16470SRKKLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06710.13e-19HD-ZIP family protein