PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA10G22030.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 726aa MW: 78152.3 Da PI: 6.183

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA10G22030.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39	1.5e-12	551	596	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YI++L ONIVA10G22030.1 551 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAISYINEL 596 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 726 aa Download sequence
MDGPDFLAGV LFQIKSNLEE EEIEIKSMNL WTDDNASMME AFMASADLPA FPWGAASTPP 60 PPPPPPHHHH QQQQQQVLPP PAAAPAAAAF NQDTLQQRLQ SIIEGSRETW TYAIFWQSSI 120 DVSTGASLLG WGDGYYKGCD DDKRKQRSST PAAAAEQEHR KRVLRELNSL IAGAGAAPDE 180 AVEEEVTDTE WFFLVSMTQS FPNGLGLPGQ ALFAAQPTWI ATGLSSAPCD RARQAYTFGL 240 RTMVCLPLAT GVLELGSTDV IFQTGDSIPR IRALFNLSAA AASSWPPHPD AASADPSVLW 300 LADAPPMDMK DSISAADISV SKPPPPPPHQ IQHFENGSTS TLTENPSPSV HAPTPSQPAA 360 PPQRQQQQQQ SSQAQQGPFR RELNFSDFAS NGGAAAPPFF KPETGEILNF GNDSSTGRRN 420 PSPAPPAATA SLTTAPGSLF SQHTPTLTAA ANDAKSNNQK RSMEATSRAS NTNNHPAATA 480 NEGMLSFSSA PTTRPSTGTG APAKSESDHS DLEASVREVE SSRVVAPPPE AEKRPRKRGR 540 KPANGREEPL NHVEAERQRR EKLNQRFYAL RAVVPNVSKM DKASLLGDAI SYINELRGKL 600 TALETDKETL QSQMESLKKE RDARPPAPSG GGGDGGARCH AVEIEAKILG LEAMIRVQCH 660 KRNHPAARLM TALRELDLDV YHASVSVVKD LMIQQVAVKM ASRVYSQDQL NAALYTRIAE 720 PGTAAR

Sequence ? help Back to Top

Protein Sequence Length: 726 aa Download sequence

MDGPDFLAGV LFQIKSNLEE EEIEIKSMNL WTDDNASMME AFMASADLPA FPWGAASTPP  60
PPPPPPHHHH QQQQQQVLPP PAAAPAAAAF NQDTLQQRLQ SIIEGSRETW TYAIFWQSSI  120
DVSTGASLLG WGDGYYKGCD DDKRKQRSST PAAAAEQEHR KRVLRELNSL IAGAGAAPDE  180
AVEEEVTDTE WFFLVSMTQS FPNGLGLPGQ ALFAAQPTWI ATGLSSAPCD RARQAYTFGL  240
RTMVCLPLAT GVLELGSTDV IFQTGDSIPR IRALFNLSAA AASSWPPHPD AASADPSVLW  300
LADAPPMDMK DSISAADISV SKPPPPPPHQ IQHFENGSTS TLTENPSPSV HAPTPSQPAA  360
PPQRQQQQQQ SSQAQQGPFR RELNFSDFAS NGGAAAPPFF KPETGEILNF GNDSSTGRRN  420
PSPAPPAATA SLTTAPGSLF SQHTPTLTAA ANDAKSNNQK RSMEATSRAS NTNNHPAATA  480
NEGMLSFSSA PTTRPSTGTG APAKSESDHS DLEASVREVE SSRVVAPPPE AEKRPRKRGR  540
KPANGREEPL NHVEAERQRR EKLNQRFYAL RAVVPNVSKM DKASLLGDAI SYINELRGKL  600
TALETDKETL QSQMESLKKE RDARPPAPSG GGGDGGARCH AVEIEAKILG LEAMIRVQCH  660
KRNHPAARLM TALRELDLDV YHASVSVVKD LMIQQVAVKM ASRVYSQDQL NAALYTRIAE  720
PGTAAR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	533	541	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	1e-131	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA10G22030.1