PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA11G01050.5
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family WRKY
Protein Properties Length: 217aa    MW: 24779.4 Da    PI: 6.5667
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA11G01050.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY59.27.9e-1959123259
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSST....TEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedp....kvveitYegeHnhe 59 
                      +Dg++WrKYGqK +  ++++rsYYrC+ +   gCp++k v++ ++ +    k++++ Y g+H+++
  ONIVA11G01050.5  59 NDGHQWRKYGQKWISRAKHSRSYYRCANRkvqGCPATKTVQQMDSSGngtsKLFNVDYYGQHTCR 123
                      8**************************988889********99876522226899*******995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MLELGGDTNK LTNLVGGKRK GDKHSMDNHN LEEEAKESVS KRRKNAEHTG STVAQAPHND  60
GHQWRKYGQK WISRAKHSRS YYRCANRKVQ GCPATKTVQQ MDSSGNGTSK LFNVDYYGQH  120
TCRGDGIANP YVVDTAHHSM EPINQNECNS PTLEHEAHEV QDERFENLCM VQNMPEYLID  180
FELERAFEFI VNSPLGSEHW TFDDSIRCEH SPICIWG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.13e-17WRKY family protein