PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA11G01600.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

GRAS

Protein Properties

Length: 218aa MW: 23841 Da PI: 5.6487

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA11G01600.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	216.9	1e-66	2	211	156	374
GRAS 156 eeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhn 249 e+le+tg+rL++fA++lg+pfef + va++ +l++e+L v ++Ea+aV++ h+l+d ++s ++ +L+l+++l Pkvv++veq+++h ONIVA11G01600.1 2 EALEATGKRLSDFADTLGLPFEFCP-VADKAGNLDPEKLGVTRREAVAVHWLR--HSLYDVTGSDSN----TLWLIQRLAPKVVTMVEQDLSH- 87 689********************.7********************99..999999999999....******************. PP GRAS 250 sesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrk 343 s+sFl+rf+ea++yysalfdsl+a+++++s er++vE++ll+rei+nv+a g +r+ + + +++Wre+l ++GF+ +l +aa+qa lll + ONIVA11G01600.1 88 SGSFLARFVEAIHYYSALFDSLDASYSEDSPERHVVEQQLLSREIRNVLAVGGPARTGDVK-FGSWREKLAQSGFRVSSLAGSAAAQAALLLGM 180 899************************************************999987.**************************** PP GRAS 344 vksdgyrveeesgslvlgWkdrpLvsvSaWr 374 ++sdgy++ ee+g+l lgWkd L+++SaWr ONIVA11G01600.1 181 FPSDGYTLIEENGALKLGWKDLCLLTASAWR 211 ****************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence
MEALEATGKR LSDFADTLGL PFEFCPVADK AGNLDPEKLG VTRREAVAVH WLRHSLYDVT 60 GSDSNTLWLI QRLAPKVVTM VEQDLSHSGS FLARFVEAIH YYSALFDSLD ASYSEDSPER 120 HVVEQQLLSR EIRNVLAVGG PARTGDVKFG SWREKLAQSG FRVSSLAGSA AAQAALLLGM 180 FPSDGYTLIE ENGALKLGWK DLCLLTASAW RPIQASGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54220.1	1e-114	GRAS family protein

Link Out ? help Back to Top
Ensembl	ONIVA11G01600.1