PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA11G01650.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 247aa    MW: 27250.4 Da    PI: 8.2062
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA11G01650.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM84.22.6e-2668562128
              NAM  62 skrdkkyatgkrknratksgyWkatgkdkevlsk.............kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +++d ky+tg r+nratk+gyWkatgkd+e+++              +++lvg+kktLvfy grapkg+kt+Wvmhe+rl
  ONIVA11G01650.1   6 CHKDMKYPTGMRTNRATKEGYWKATGKDREIFNLqptsyggssnnknNKQLVGMKKTLVFYMGRAPKGTKTNWVMHEFRL 85 
                      6899****************************9888999888887766677***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MGEKECHKDM KYPTGMRTNR ATKEGYWKAT GKDREIFNLQ PTSYGGSSNN KNNKQLVGMK  60
KTLVFYMGRA PKGTKTNWVM HEFRLHANLH NDNPNLRLNP KDEWVVCKVF HKKGDDREAI  120
NKQQAQAAAV DQYSAGTPNN GSSVEAGDDD DDLFQLDSII DPSIYFSNSS AANILSAPPN  180
MSNSVVAANY GASTTTTAEG GVHGIGSSYS LQHQAAMVKA LRDVIRLPNP LGMPQYKLDD  240
AYLWDSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18270.28e-39NAC family protein