PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA11G03260.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GATA
Protein Properties Length: 344aa    MW: 36689.9 Da    PI: 9.6427
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA11G03260.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.81.3e-17172205134
             GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                      Cs C+ttkTplWR+gp g+k+LCnaCG+++rk +
  ONIVA11G03260.1 172 CSDCNTTKTPLWRSGPCGPKSLCNACGIRQRKAR 205
                      *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MSTIYMSQLP ATLPLMEGDQ DQGLYPAFHR AKDPLILFPF MIDSAVEHQG QIYGDQGLRR  60
QQVLGESNQQ FNDHMMMGGS DVFLTPSPFR PTIQSIGSDM IQRSSYDPYD IESNNKQHAN  120
GSTPPMKMRI IRKGAATDPE GGAVRKPRRR AQAHQDESQQ QLQQALGVVR VCSDCNTTKT  180
PLWRSGPCGP KSLCNACGIR QRKARRAMAA AANGGAAVAP AKSVAAAPVN NKPAAKKEKR  240
AADVDRSLPF KKRCKMVDHV AAAVAATKPT AAGEVVAAAP KDQDHVIVVG GENAAATSMP  300
AQNPISKAAA AAAASPAFFH GLPRDEITDA AMLLMTLSCG LVHS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1202239RKARRAMAAAANGGAAVAPAKSVAAAPVNNKPAAKKEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56860.11e-16GATA family protein