PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA11G03290.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 633aa MW: 65818.3 Da PI: 8.5798

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA11G03290.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.6	1.7e-11	425	468	5	53
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 h + ErrRR+r+N++fe Lr llP+ K +Ka++L k+ eY++ ONIVA11G03290.1 425 HMISERRRRERLNESFEHLRGLLPPG-----SKKDKATVLAKTLEYMNL 468 8899******************95.....599**********975 PP

Sequence ? help Back to Top
Protein Sequence Length: 633 aa Download sequence
MDTIFVLGQE SRQRILHRAA ARLPGCAYVC AWAPLPLVAA AGLHHQRPSS GGAAGAARLL 60 YCVDGWLSGG EDGGGCVRVL FDAYRGSVCG AVTGCVPGWA YVGGGGGAFM ELSELELVAS 120 ASLPVQQSFY QEAGIKMAAF MGCESGEIEV GFSTAPAENY GGGGGGGSLQ ASVEQVFSED 180 FFQQSLLEEL LQLPPTRPSS SSSSLVGSPA DGAASTSLLR TMTPMMASSS ATPSPRELAA 240 QVATTTTTTP SSSSRLHPRP PAPHHVHVSP FSRHGGVGGS GVLHFPSAEA DDAAMAQAML 300 DVISSPSTSS SAAALHAPWS SVKHRAQIIR SPRRGTPTTT AFRAYNAALA PRAAASRRPP 360 GAPGQRMIKM GFSILRRMHM VRCSQERAAA AAAAASAAAG QRSGGDDDED ATAAPPPPTS 420 SQLHHMISER RRRERLNESF EHLRGLLPPG SKKDKATVLA KTLEYMNLLI AQISELEAKN 480 RALQTQIHQR ANGSSSSRSS MIRTVNEVHH HHHHQWLAVA AAAGGSPERV QVHVIGGGDH 540 DGGASASSSS SAPEVTVRVA VRAPERGGAD VSELVLRVLA LLKAMGGFTV VAVDARQPGG 600 GGGNGVAQAS LTLRATLVYY LELLHFVFIV MGS

Sequence ? help Back to Top

Protein Sequence Length: 633 aa Download sequence

MDTIFVLGQE SRQRILHRAA ARLPGCAYVC AWAPLPLVAA AGLHHQRPSS GGAAGAARLL  60
YCVDGWLSGG EDGGGCVRVL FDAYRGSVCG AVTGCVPGWA YVGGGGGAFM ELSELELVAS  120
ASLPVQQSFY QEAGIKMAAF MGCESGEIEV GFSTAPAENY GGGGGGGSLQ ASVEQVFSED  180
FFQQSLLEEL LQLPPTRPSS SSSSLVGSPA DGAASTSLLR TMTPMMASSS ATPSPRELAA  240
QVATTTTTTP SSSSRLHPRP PAPHHVHVSP FSRHGGVGGS GVLHFPSAEA DDAAMAQAML  300
DVISSPSTSS SAAALHAPWS SVKHRAQIIR SPRRGTPTTT AFRAYNAALA PRAAASRRPP  360
GAPGQRMIKM GFSILRRMHM VRCSQERAAA AAAAASAAAG QRSGGDDDED ATAAPPPPTS  420
SQLHHMISER RRRERLNESF EHLRGLLPPG SKKDKATVLA KTLEYMNLLI AQISELEAKN  480
RALQTQIHQR ANGSSSSRSS MIRTVNEVHH HHHHQWLAVA AAAGGSPERV QVHVIGGGDH  540
DGGASASSSS SAPEVTVRVA VRAPERGGAD VSELVLRVLA LLKAMGGFTV VAVDARQPGG  600
GGGNGVAQAS LTLRATLVYY LELLHFVFIV MGS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	429	434	ERRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	2e-12	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA11G03290.1