PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA11G03770.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 903aa MW: 98073.6 Da PI: 6.3047

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA11G03770.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.1	0.00074	708	745	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLre++P+ a K s + Lek+v+++ Lq ONIVA11G03770.1 708 RQLIQDRIKELREMVPNgA------KCSIDALLEKTVKHMLFLQ 745 67799**********66......999999******99998 PP

Sequence ? help Back to Top
Protein Sequence Length: 903 aa Download sequence
MAVGDALRRL CEEVGWSYAV FWKAIGAADP VHLVWEDGYC GHASCPAGSD PSEALPTDVG 60 CAAAADTMTM CSLVNKVMAS QVHVVGEGTV GRAAFTGNHQ WIIHGTANDH GIPSEVAAEM 120 SYQFRVGIQT IAIIPVLPRG VLQLGSTGVV LENKSFMTHA KKLCSQLNNR SSMAVSSSVK 180 NSSSQQGRSR PLHGASNVQS TENRSKLFSQ FPVTCEQYNH PDTMAVSGSS TSLNACMNGS 240 LLKIAQLNGQ AVREHIVYSK PDVRFIQQVY RDGQLGSNAQ SIAMSSDLIS SSLRSVQKQP 300 LLMNNISQLE YGDGAETSAD LRKNVLLKPP VCLDPFIHDR NINISHGITE VSNVINDHGN 360 FDFLSGGARV VRANLCTSAT SQVLDRRSHS VSGMLLHREP IVSCEVPQSS EFSTKMGSLE 420 RGSFQISSAP SSESDVQISN GLNTSISREN QLSVSNHICQ DQKINGVNDL SATLSTERMN 480 NMDGCKPPGL SLERTSPLFM EQSVENDLFD ILGPQFHHLC HNAGADLVPW TDAKPESSDR 540 DVPESSIHAD SAPLFSSRDN ELYSGIFSLT DTDQLLDAVI SNVNPAGKQS SDDSASCKTS 600 LTDIPATSYL CSKEMKQCGS SGVPSVLIKN ESAQFIKQPC LAENAEDGCL SQNNGMHKSQ 660 IRLWIESGQS MKCESASTSN SKGLDTPSKA NRKRSRPGES PKPRPKDRQL IQDRIKELRE 720 MVPNGAKCSI DALLEKTVKH MLFLQSVTKH ADKLKDSTES KILGSENGPV WKDYFEGGAT 780 WAFDVGSQSM TCPIIVEDLD RPRQMLVEMI CEDRGIFLEI ADFIKGLGLT ILRGAMEARK 840 SKIWARFTVE ANRDVTRMEI FLSLVRLLEP NCDSSGAAEN ANNVNMPLGL VHQPVIPATG 900 RIQ

Sequence ? help Back to Top

Protein Sequence Length: 903 aa Download sequence

MAVGDALRRL CEEVGWSYAV FWKAIGAADP VHLVWEDGYC GHASCPAGSD PSEALPTDVG  60
CAAAADTMTM CSLVNKVMAS QVHVVGEGTV GRAAFTGNHQ WIIHGTANDH GIPSEVAAEM  120
SYQFRVGIQT IAIIPVLPRG VLQLGSTGVV LENKSFMTHA KKLCSQLNNR SSMAVSSSVK  180
NSSSQQGRSR PLHGASNVQS TENRSKLFSQ FPVTCEQYNH PDTMAVSGSS TSLNACMNGS  240
LLKIAQLNGQ AVREHIVYSK PDVRFIQQVY RDGQLGSNAQ SIAMSSDLIS SSLRSVQKQP  300
LLMNNISQLE YGDGAETSAD LRKNVLLKPP VCLDPFIHDR NINISHGITE VSNVINDHGN  360
FDFLSGGARV VRANLCTSAT SQVLDRRSHS VSGMLLHREP IVSCEVPQSS EFSTKMGSLE  420
RGSFQISSAP SSESDVQISN GLNTSISREN QLSVSNHICQ DQKINGVNDL SATLSTERMN  480
NMDGCKPPGL SLERTSPLFM EQSVENDLFD ILGPQFHHLC HNAGADLVPW TDAKPESSDR  540
DVPESSIHAD SAPLFSSRDN ELYSGIFSLT DTDQLLDAVI SNVNPAGKQS SDDSASCKTS  600
LTDIPATSYL CSKEMKQCGS SGVPSVLIKN ESAQFIKQPC LAENAEDGCL SQNNGMHKSQ  660
IRLWIESGQS MKCESASTSN SKGLDTPSKA NRKRSRPGES PKPRPKDRQL IQDRIKELRE  720
MVPNGAKCSI DALLEKTVKH MLFLQSVTKH ADKLKDSTES KILGSENGPV WKDYFEGGAT  780
WAFDVGSQSM TCPIIVEDLD RPRQMLVEMI CEDRGIFLEI ADFIKGLGLT ILRGAMEARK  840
SKIWARFTVE ANRDVTRMEI FLSLVRLLEP NCDSSGAAEN ANNVNMPLGL VHQPVIPATG  900
RIQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	2e-54	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA11G03770.1