PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA11G08980.3

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Nin-like

Protein Properties

Length: 923aa MW: 101987 Da PI: 6.4608

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA11G08980.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.6	2.9e-29	591	641	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rkik++ ONIVA11G08980.3 591 EKSVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKIKKV 641 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 923 aa Download sequence
MDGGGTPDGD PVPDMDMLML SSALDGLDSY TDLVAGSSVA DSIFSALTCF PPSQERLLHV 60 STPVGSNSRQ DDSDVSITKE GTTTRRGDCA AGLASGEPVA AGIGSVPKPF DGVTLTERML 120 RALAMLKEAS GGEAILVQVW MPVRNGEQHV LTTSDQPFLL DQKLTGYREV SRQFTFSAEE 180 GPGLFPGLPG RVFMSGMPEW TSNVMYYHGS EYLRVDYARR HEVRGSLAMP VFNSSGGSCC 240 AVLEVVMTRE KDNFCLEMVN VSNALQAFNN PLFLLCAAQR YAQLQCNTAK YLFKELSTVA 300 SELNSDIVIL QSVQLSTVNA WRHSQSYSRD QKLALMEIFD VLQAVCQAHL LPLALAWIPV 360 CSKRDVLVSV EYGANFGKRN KEVLCIEESA CYVNDTRMRD FVQVCAEHPL EKGQGVAGNA 420 YLSNNPFFSS DVKDYDMHAY PLVNHARKFG LHAAVAIRLR STYTKNDDYV LEFFLPVLCK 480 GGGEQQLLLD SISVTMRRVC KSLRTVSDAE LKEDVTRKPS NENRSGTRCP SPVNLIYSGR 540 EIDVSNETKT NTPLEYQIEG IDEQLSDTKS TNKLIKCSNA SDGEKRRSST EKSVSLSVLQ 600 QYFSGSLKDA AKSIGVCPTT LKRICRQHGI SRWPSRKIKK VNRSLKKIQN VISSVHGVEG 660 VLKYDPSTGC LVSSVSPSIE PVLMNVEHKG QDVLQKLQNK QNGEINFDMD DGELFRNSHS 720 TRTLSGAFCE DMPNGLYVAR EMTCVAKTGT RTERLEHKPS SRDTFSAPQE YRMESETDKS 780 NKNSKQSLPS SSSMTDCSTS SGETFKSIKS QSANESNKTV AVKASYKNDT IRFKLLPSMK 840 YEQLLEEIAK RLKLSIGLFQ LKYKDDEGDW VILASDADLQ ECLEILDTTR LRILKLQVQD 900 VVCPIGSSSE RCGFGSTVID LFI

Sequence ? help Back to Top

Protein Sequence Length: 923 aa Download sequence

MDGGGTPDGD PVPDMDMLML SSALDGLDSY TDLVAGSSVA DSIFSALTCF PPSQERLLHV  60
STPVGSNSRQ DDSDVSITKE GTTTRRGDCA AGLASGEPVA AGIGSVPKPF DGVTLTERML  120
RALAMLKEAS GGEAILVQVW MPVRNGEQHV LTTSDQPFLL DQKLTGYREV SRQFTFSAEE  180
GPGLFPGLPG RVFMSGMPEW TSNVMYYHGS EYLRVDYARR HEVRGSLAMP VFNSSGGSCC  240
AVLEVVMTRE KDNFCLEMVN VSNALQAFNN PLFLLCAAQR YAQLQCNTAK YLFKELSTVA  300
SELNSDIVIL QSVQLSTVNA WRHSQSYSRD QKLALMEIFD VLQAVCQAHL LPLALAWIPV  360
CSKRDVLVSV EYGANFGKRN KEVLCIEESA CYVNDTRMRD FVQVCAEHPL EKGQGVAGNA  420
YLSNNPFFSS DVKDYDMHAY PLVNHARKFG LHAAVAIRLR STYTKNDDYV LEFFLPVLCK  480
GGGEQQLLLD SISVTMRRVC KSLRTVSDAE LKEDVTRKPS NENRSGTRCP SPVNLIYSGR  540
EIDVSNETKT NTPLEYQIEG IDEQLSDTKS TNKLIKCSNA SDGEKRRSST EKSVSLSVLQ  600
QYFSGSLKDA AKSIGVCPTT LKRICRQHGI SRWPSRKIKK VNRSLKKIQN VISSVHGVEG  660
VLKYDPSTGC LVSSVSPSIE PVLMNVEHKG QDVLQKLQNK QNGEINFDMD DGELFRNSHS  720
TRTLSGAFCE DMPNGLYVAR EMTCVAKTGT RTERLEHKPS SRDTFSAPQE YRMESETDKS  780
NKNSKQSLPS SSSMTDCSTS SGETFKSIKS QSANESNKTV AVKASYKNDT IRFKLLPSMK  840
YEQLLEEIAK RLKLSIGLFQ LKYKDDEGDW VILASDADLQ ECLEILDTTR LRILKLQVQD  900
VVCPIGSSSE RCGFGSTVID LFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	1e-172	Nin-like family protein

Link Out ? help Back to Top
Ensembl	ONIVA11G08980.3