PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA11G11690.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family C2H2
Protein Properties Length: 452aa    MW: 45893.9 Da    PI: 5.5283
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA11G11690.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.40.00047117139123
                      EEETTTTEEESSHHHHHHHHHHT CS
          zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                      + C +C k F ++     Hir+H
  ONIVA11G11690.1 117 FACRICRKEFDTRKAVDGHIRVH 139
                      78*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    
MEGGNSSKGA MEGGHRCRRP NVDDDDQIEE GEICYDCHVS GSETDDDEHH RRAVLPPRDN  60
GDGCAEHKRC RLDNAATAPA PSAGPVLTTS NGSAIVAIAS AAAAAAAAAS TMAREVFACR  120
ICRKEFDTRK AVDGHIRVHR QQSIATPKYN AADNSRVTVV AEPRTDLDLS GPHGSSSAPP  180
SPPAPPANPP NHNQAVGHQP AAAAPNAGVV VVVEGAPQKS LPYMCKMQGC GRAFPTHQGL  240
GGHAAGHQNR SKAAAAAASE QGSSGAGADG CHGGADSSKH RCRECGMEWK TGFALGGHMR  300
KHQTKEKVTV NEKEPNVAGK HISLGPPPSP DLTPAAAEVT SSEPLDQPPL LSMVVGAEVA  360
APALLALANE AAALPPQDDQ AEEEAAAEAA APAEAAALRP VEAGAEAADV GAAPEEPLLA  420
PIAGMGTVRI FGFLVEKPAP GDGSGGEGSA PA