PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA11G13150.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family WRKY
Protein Properties Length: 242aa    MW: 25857.2 Da    PI: 9.3347
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA11G13150.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY106.41.5e-33136194159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d++vv++tYeg+H+h+
  ONIVA11G13150.1 136 LDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLSRDETVVVTTYEGTHTHP 194
                      59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MENFPILFAT QPTSSSTSSS YHFMSSSSGS HDHRHHHGLQ AGGNGGGGGG SLSHGLFMGS  60
SSSSIRMEEL SNSKQAGDVV VDGGATRSPH GGDGDGAAGD DGGDAQAAAA GGRKKGEKKE  120
RRPRFAFQTR SQVDILDDGY RWRKYGQKAV KNNKFPRSYY RCTHQGCNVK KQVQRLSRDE  180
TVVVTTYEGT HTHPIEKSND NFEHILTQMH IYSGLTPSSA AHASSSSPLF PSAAAAASHM  240
FQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.16e-55WRKY family protein