PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA11G16350.2
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family B3
Protein Properties Length: 380aa    MW: 43105.8 Da    PI: 9.892
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA11G16350.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.22.6e-1721971698
                     EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
               B3 16 lvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                     + +p +f  ++ ++++++  +++l d+sg++W+ +l  +  s+++++  GWkeFv++n ++ g f+vF++d+rs+f   v+vf+
  ONIVA11G16350.2 21 MKIPSSFN-QClQNQPTG--MVSLVDRSGNKWSAEL--TSDSEGFFFVHGWKEFVRDNSIQCGQFLVFTYDKRSQF--SVTVFE 97
                     78999997.554666665..8***************..*********************************99999..888876 PP
2B352.59.2e-17274365398
                      EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
               B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                      ++++ s+v     + +p +f++e+   ++++k +tl d++g+ Wev++ y   ++   +++GW +F+  n+L+  D++vF+l+++++   +v++
  ONIVA11G16350.2 274 QIMMESYVYVGFFMNIPCEFVRECL--PRTNKRITLWDPQGKAWEVNYVYYSDRSVGSFSGGWGKFAVGNNLEKFDVCVFELVQKDN--IKVHI 363
                      6789999999**************5..345678***************995555556799*********************998444..57887 PP

                      E- CS
               B3  97 fr 98 
                      +r
  ONIVA11G16350.2 364 YR 365
                      76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    
MDWRKNREVG RSRREEERVV MKIPSSFNQC LQNQPTGMVS LVDRSGNKWS AELTSDSEGF  60
FFVHGWKEFV RDNSIQCGQF LVFTYDKRSQ FSVTVFEPSG IDKISTFSAH PSKNVIIKTE  120
SDEGGMVTAA ITTEKMAPAL KENNGITGKR TRDVDYLMED RVVVFKKSSE ANVCESSRRK  180
RAGASAGKSK VTSTSHNSTR GSSCSSDEDN SSSKSPNPPF LMRFLSGEVS RRGVSKGQRQ  240
LTVISQRRPV TEAEKDHALQ RAREFKSKNP FAVQIMMESY VYVGFFMNIP CEFVRECLPR  300
TNKRITLWDP QGKAWEVNYV YYSDRSVGSF SGGWGKFAVG NNLEKFDVCV FELVQKDNIK  360
VHIYRVVPEI TPHKLRSDPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.13e-19B3 family protein