PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA11G18690.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 107aa MW: 11739.2 Da PI: 9.6861

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA11G18690.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12	0.00039	37	60	1	24
CHHHHHHHHHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLr 24 +++ + erE+ Rd++N+ f eL ONIVA11G18690.1 37 KKTHKAEREKLKRDQLNDLFVELS 60 678899***************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 107 aa Download sequence
MVADTESSGS LGGSSNAASD KAVDGSLDKR SQEKAPKKTH KAEREKLKRD QLNDLFVELS 60 NPERQNSGKA TVLGDAARVL RDLVSQVESL RKEQSALLTE RQYLILK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47640.2	1e-21	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA11G18690.1