PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA11G20620.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 258aa    MW: 28832.2 Da    PI: 4.9995
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA11G20620.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.43.9e-111832231055
                      HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      +rRR+riN+++  L++l+P+      +K++ +++Le+Av+Y+k Lq
  ONIVA11G20620.1 183 KRRRERINERLRILQQLVPNG-----TKVDISTMLEEAVQYVKFLQ 223
                      9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MDARCANIWS SADARSEESE MIDQLKSMFW SSTDAEINFY SPDSSVNSCV TTSTMPSSLF  60
LPLMDDEGFG TVQLMVSTGM DMCSDHQHQV ITGNKRMFPM DEHFEQQQKK PKKKTRTSRS  120
VSSSSTITDY ETSSELVNPS CSSGSSVGED SIAATDGSVV LKQSGNSRGH KQCSKDTQSL  180
YAKRRRERIN ERLRILQQLV PNGTKVDIST MLEEAVQYVK FLQLQIKLLS SDDTWMFAPL  240
AYNGMNMDLG HTLAENQE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27740.11e-32bHLH family protein