PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA12G01160.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NAC

Protein Properties

Length: 395aa MW: 43747.9 Da PI: 9.1777

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA12G01160.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.5	8.8e-52	19	160	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 lppGfrFhPtd e++ yL +k+ + +++ i evd++k+ePwdLp+k+k +ekewyfFs++d ky+tg r+nratk+gyWkatgkd+e+++ ONIVA12G01160.1 19 LPPGFRFHPTDAEVILSYLLQKLLNPSFTS-LPIGEVDLNKCEPWDLPSKAKMGEKEWYFFSHKDMKYPTGMRTNRATKEGYWKATGKDREIFR 111 79***********************888.56***********99999************************************* PP NAM 95 k...............kgelvglkktLvfykgrapkgektdWvmheyrl 128 + k++lvg+kktLvfy grapkg+kt+Wvmhe+rl ONIVA12G01160.1 112 QpaavntssyggssnkKKQLVGMKKTLVFYMGRAPKGTKTNWVMHEFRL 160 99999888888887766667*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MVESTTSLVK LEQDGGLFLP PGFRFHPTDA EVILSYLLQK LLNPSFTSLP IGEVDLNKCE 60 PWDLPSKAKM GEKEWYFFSH KDMKYPTGMR TNRATKEGYW KATGKDREIF RQPAAVNTSS 120 YGGSSNKKKQ LVGMKKTLVF YMGRAPKGTK TNWVMHEFRL HANLHNHHPN LRLNPKDEWV 180 VCKVFHKKQG DEAINNQQQQ PQYAAVDQYS AETPNSGSSV VQAGDIDGGD DFFQLDDIID 240 PSIYFVSNSS NILSAPPNNN NAVYSVSAST TTTNTTAVSF QQQPNYYSLI NKSSSSSSNY 300 SAPLQQHVSS WNNTPGAGGA HGIGSSYYNL QQQQAAMVKA LENVIAVPNF GTLLPSSNKL 360 KGLSKSAMAG VTQQNPLGVP QYKIENYGDH YISRQ

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MVESTTSLVK LEQDGGLFLP PGFRFHPTDA EVILSYLLQK LLNPSFTSLP IGEVDLNKCE  60
PWDLPSKAKM GEKEWYFFSH KDMKYPTGMR TNRATKEGYW KATGKDREIF RQPAAVNTSS  120
YGGSSNKKKQ LVGMKKTLVF YMGRAPKGTK TNWVMHEFRL HANLHNHHPN LRLNPKDEWV  180
VCKVFHKKQG DEAINNQQQQ PQYAAVDQYS AETPNSGSSV VQAGDIDGGD DFFQLDDIID  240
PSIYFVSNSS NILSAPPNNN NAVYSVSAST TTTNTTAVSF QQQPNYYSLI NKSSSSSSNY  300
SAPLQQHVSS WNNTPGAGGA HGIGSSYYNL QQQQAAMVKA LENVIAVPNF GTLLPSSNKL  360
KGLSKSAMAG VTQQNPLGVP QYKIENYGDH YISRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18270.2	6e-71	NAC family protein

Link Out ? help Back to Top
Ensembl	ONIVA12G01160.1