PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA12G03060.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 307aa    MW: 32521.3 Da    PI: 7.1786
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA12G03060.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM130.21.6e-40191542128
              NAM   2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                      +pGfrF Pt+eel+ +yL+++++g++  ++++vi+ vd+y ++P++L +    ++++++++w+fF++r++++ +g r+ r+t sgyWkatg+  
  ONIVA12G03060.1  19 TPGFRFYPTEEELIGFYLRHRLAGTRaDDVARVIPVVDVYGYHPSQLAAmagvATAGDREQWFFFCPRAERELHGGRPARTTPSGYWKATGSPS 112
                      69**********************995666778**************8445544444666********************************** PP

              NAM  91 evlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       v+s+      +++g+k+t+vfy+grap+g+kt+W m+ey++
  ONIVA12G03060.1 113 FVFSSssaaAARVIGVKRTMVFYQGRAPSGTKTRWKMNEYKA 154
                      ***9866665666***************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MVMSGGGGGA RIVSDPAATP GFRFYPTEEE LIGFYLRHRL AGTRADDVAR VIPVVDVYGY  60
HPSQLAAMAG VATAGDREQW FFFCPRAERE LHGGRPARTT PSGYWKATGS PSFVFSSSSA  120
AAARVIGVKR TMVFYQGRAP SGTKTRWKMN EYKAVAAAAA DDDHNAAGVA VQLPPMAPPP  180
SSSACVRLRN ELSVCRVYVS TGTLRSFDRR PLDAPPVISH HQPQLQQQQR QLPSSAAAAA  240
TNGNLIALAG GYECSHDSSG GSSEDAAIDW SSLITAATDS ATAAVDFSFN DDIDFSPAAV  300
GPWAPQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.12e-62NAC family protein