PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA12G05700.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

DBB

Protein Properties

Length: 214aa MW: 21928.1 Da PI: 4.8508

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA12G05700.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.5	4.8e-07	5	46	6	41
zf-B_box 6 CpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 C+ +e+ e+ C ++ lC+ C + H+ Ht+v ONIVA12G05700.1 5 CDACEQAEAAVLCCADEAALCRRCDAAVHSAnrlagkHTRVA 46 *****************************6688999999876 PP
2	zf-B_box	25.7	2.4e-08	64	99	4	37
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg..H 37 ++C+ ++ek +fC +++ llC++C ++ H H ONIVA12G05700.1 64 PTCDICQEKTGYFFCLEDRALLCRSCDVAVHTAtaH 99 79****************************955663 PP

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence
MKIGCDACEQ AEAAVLCCAD EAALCRRCDA AVHSANRLAG KHTRVALLLP SSSSAAAGDD 60 DHHPTCDICQ EKTGYFFCLE DRALLCRSCD VAVHTATAHA AAHRRFLITG VRIGGSVDAA 120 AAADVIVSPT SSSIAPAGSA SSNHAVAGAG AAGNNNGRSP APVRFSGGDG GVEPEQQWPW 180 SDVFAADDDD DVSAAMEQCY YHGISEPHSS SLTG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	9e-34	DBB family protein

Link Out ? help Back to Top
Ensembl	ONIVA12G05700.1