PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA12G06190.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family Nin-like
Protein Properties Length: 386aa    MW: 41324.4 Da    PI: 7.1228
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA12G06190.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK79.83e-25300350252
           RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                      +k+++l+d++ yF+lpi++AAk+L++c+T+LK iCR++G+ RWP+Rk++s+
  ONIVA12G06190.1 300 TKQLQLSDIAPYFELPIAKAAKKLDICATALKGICRKHGVLRWPYRKVRSI 350
                      89**********************************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    
MAGDGGNGAA DGGGEHLELD FFPSPLLDNF DYGGASTSSS AAPAPAPPQE DYCSGCQVLR  60
EVVHSNGLEI TKLCIHGGVA SGEFYHAILD VYRVSASAPA PALAHHSIIK GRGYDWVKQY  120
LTEYALRRAG GGFAVVQDSL SAFHDALCTT MAPCSSHVGD DDAHRRASSS SAAAAEERTN  180
GNGDHGQLVV HNAAVLPMLE SSRCLVAADQ AATTNNNGSG DRRLLVLDTT AIQPPASGCI  240
LHMAFPSKSY QSSRPTTLPS RYQECTCNPV AYEMDGVRSS LAPICWPELL GYNVTNREKT  300
KQLQLSDIAP YFELPIAKAA KKLDICATAL KGICRKHGVL RWPYRKVRSI DRQIATLRRS  360
GNGDATRNEI ETLIASRRRI VAGLDQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53040.12e-13Nin-like family protein