PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA12G08480.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

HB-other

Protein Properties

Length: 80aa MW: 9653.37 Da PI: 9.9778

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA12G08480.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	14.9	4.5e-05	54	79	20	45
HHSSS--HHHHHHHHHHCTS-HHHHH CS Homeobox 20 eknrypsaeereeLAkklgLterqVk 45 ++ +yps+ e+ LAk++gL+ +q+ ONIVA12G08480.1 54 YRWPYPSEMEKIALAKSMGLEPKQIN 79 4679********************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 80 aa Download sequence
MLLPLWMLLY HHHRGDEDEA YFIGSMAELS KKRKKGKLLK EARQKLLTWW ELHYRWPYPS 60 EMEKIALAKS MGLEPKQINN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	31	35	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	6e-19	TALE family protein

Link Out ? help Back to Top
Ensembl	ONIVA12G08480.1